GABAA subunit a6

Click on sections of picture to learn more about research on individual amino acids. Numbering of the GABAA b3 subunit sequences start at the beginning of the signal sequence. Only amino acids in the mature protein are shown.

amino acid all N-Terminus M1 M1-M2 Linker M2 M2-M3 Linker M3 M4 M3-M4 Linker

GABAA a6 -- GENBANK

GABAA a6 -- FASTA

GABAA a6 -- Alignment

 

 

 

 

 

 

 

 

 

 

 

 

 

N-Terminus

Leu 20 Leu 2 Lys 1 Glu 11 Gln 28 Gln 28 Gln 28 Ile 43 Tyr 44 Val 45 Asp 42 Thr 41 Lys 40 Val 39 Glu 38 Thr 37 Val 36 Ala 35 Gly 34 Gly 33 Phe 32 Gly 31 Pro 30 Asn 12 Asn 19 Asp 37 Gln 28 Ser 14 Val 13 Arg 15 Asp 18 Leu 17 Ile 16 Leu 21 Glu 22 Gly 23 Tyr 24 Asp 25 Asn 26 Arg 29 Leu 28 Arg 27 Thr 46 Ser 47 Phe 48 Gly 49 Pro 50 Val 51 Ser 52 Asp 53 Val 54 Glu 55 Met 56 Glu 57 Tyr 58 Phe 64 Phe 63 Val 62 Asp 61 Met 60 Thr 59 Arg 72 Arg 65 Gln 66 Thr 67 Trp 68 Thr 69 Asp 70 Glu 71 Leu 73 Lys 74 Phe 75 Gly 76 Gly 77 Asn 85 Leu 84 Ser 83 Leu 82 Ile 81 Glu 80 Thr 79 Pro 78 Ile 106 Ser 105 Lys 104 Lys 103 Gly 102 Asn 101 Arg 100 Phe 99 Phe 98 Thr 97 Asp 96 Pro 95 Thr 94 Trp 93 Ile 92 Lys 91 Leu 87 Asn 86 Met 88 Val 89 Ser 90 Arg 118 His 108 Asn 109 Met 110 Thr 111 Thr 112 Pro 113 Lys 115 Leu 116 Phe 117 Asn 114 Thr 132 Leu 131 Met 120 Gln 121 Asn 122 Gly 123 Thr 124 Ile 125 Leu 126 Tyr 127 Thr 128 Met 129 Arg 130 Ile 133 Asn 134 Ala 135 Asp 136 Cys 137 Pro 138 Met 139 Arg 140 Leu 141 Val 142 Asn 143 Ile 119 Ala 107 Phe 155 Lys 154 Leu 153 Pro 152 Cys 151 Ala 150 His 149 Gly 148 Asp 147 Met 146 Pro 145 Phe 144 Glu 164 Ser 163 Tyr 158 Ala 159 Tyr 160 Pro 161 Lys 162 Val 177 Ser 176 Tyr 175 Leu 174 Pro 173 Gly 172 Lys 171 Lys 170 Trp 169 Thr 168 Tyr 167 Ile 166 Ile 165 Glu 178 Val 179 Pro 180 Glu 181 Glu 182 Ser 183 Ser 184 Ser 185 Leu 186 Leu 187 Gln 188 Tyr 189 Asp 190 Leu 191 Ile 192 Gly 193 Gln 194 Thr 195 Val 196 Ser 197 Ser 198 Gly 206 Thr 205 Glu 199 Thr 200 Ile 201 Lys 202 Ser 203 Asn 204 Glu 207 Gly 156 Arg 219 Gln 218 Leu 217 His 216 Phe 215 Val 213 Thr 212 Met 211 Ile 210 Val 209 Tyr 208 Tyr 214 Try 9 Asn 7 Ser 157 Ser 10 Phe 8 Lys 220 Met 221 Gly 222 Tyr 223 Phe 224 Gly 6 glu 5 Val 4 Glu 3

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M1

Met 225 Ile 226 Gln 227 Ile 228 Tyr 229 Thr 230 Pro 231 Cys 232 Ile 233 Met 234 Thr 235 Val 236 Ile 237 Leu 238 Ser 239 Gln 240 Val 241 Ser 242 Phe 243 Trp 244 Ile 245

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M1-M2 Linker

Asn 246 Lys 247 Glu 248 Ser 249 back to top

 

M2

Ser 270 Val 250 Pro 251 Ala 252 Arg 253 Thr 254 Val 255 Phe 256 Gly 257 Ile 258 Thr 259 Thr 260 Val 261 Leu 262 Thr 263 Met 264 Thr 265 Thr 266 Leu 267 Ser 268 Ile 269 Ala 271 back to top

 

M2-M3 Linker

Thr 282 Ala 281 Tyr 280 Ser 279 Val 278 Arg 272 His 273 Ser 274 Leu 275 Pro 276 Lys 277 back to top

 

M3

 

Val 305 Ala 283 Met 284 Asp 285 Trp 286 Phe 287 Ile 288 Ala 289 Val 290 Cys 291 Phe 292 Ala 293 Phe 294 Val 295 Phe 296 Ser 297 Ala 298 Leu 299 Ile 300 Glu 301 Phe 302 Ala 303 Ala 304 back to top

 

M3-M4 Linker

Asp 399 Lys 397Gln 400 Ser 396 Thr 395 Gly 393Gly 394 Asn 306 Tyr 307 Phe 308 Thr 309 Asn 310 Leu 311 Gln 312 Thr 313 Gln 314 Lys 315 Ala 316 Lys 317 Arg 318 Lys 319 Ala 320 Gln 321 Phe 322 Ala 323 Ala 324 Pro 325 Pro 326 Thr 327 Val 328 Thr 329 Ile 330 Ser 331 Lys 332 Ala 333 Thr 334 Glu 335 Pro 336 Leu 337 Glu 338 Ala 339 Glu 340 Ile 341 Val 342 Leu 343 His 344 Pro 345 Asp 346 Ser 347 Lys 348 Tyr 349 His 350 Leu 351 Lys 352 Lys 353 Arg 354 Ile 355 Thr 356 Ser 357 Leu 358 Ser 359 Leu 360 Pro 361 Ile 362 Val 363 Ser 364 Ser 365 Ser 366 Glu 367 Ala 368 Asn 369 Lys 370 Val 371 Leu 372 Thr 373 Arg 374 Ala 375 Pro 376 Ile 377 Leu 378 Gln 379 Ser 380 Thr 381 Pro 382 Val 383 Thr 384 Pro 385 Pro 386 Pro 387 Leu 388 Ser 389 Pro 390 Ala 391 Phe 392 Ile 398

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M4

Glu 435 Ser 432 Val 434 Ser 431 Ser 430 Val 429 Glu 428 Met 427 Thr 426 Asp 425 Lys 424 Tyr 401 Ser 402 Arg 403 Ile 404 Leu 405 Phe 406 Pro 407 Val 408 Ala 409 Phe 410 Ala 411 Gly 412 Phe 413 Asn 414 Leu 415 Val 416 Tyr 417 Trp 418 Val 419 Val 420 Tyr 421 Leu 422 Ser 423

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Alignment